CDS
| Accession Number | TCMCG042C72344 |
| gbkey | CDS |
| Protein Id | XP_016504480.1 |
| Location | join(76234..76332,76438..76498,76711..76747,77176..77306,77416..77502,78348..78434,79298..79385,80482..80615,81660..81799,83139..83189,83318..83400,83477..83531,84825..84939,86122..86620,86692..86905,86999..87069,88294..88462,88543..88672,88774..89507) |
| Gene | LOC107822442 |
| GeneID | 107822442 |
| Organism | Nicotiana tabacum |
Protein
| Length | 994aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA319578 |
| db_source | XM_016648994.1 |
| Definition | PREDICTED: RNA-binding protein 28-like isoform X1 [Nicotiana tabacum] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGAAAGAATAAGAAGACGATGTCTAATGGCGATAGCCAACATTCACCTGCTACCATATTCGTTACCAATTTACCTTATTCTTTCACTAATGCCCAGTTGGAAGAGACGTTCAGTGAAGTTGGACCAATTAGGCGGTGCTTTATGGTTACAAATAAAGGTTCAAGTGAGCACCGAGGCTTCGGCTTTGTGCAATTTGCATCTGTTGATGACGCTAACCGTTCCATCGAGCTAAAAAATGGCACAGTGGTTGGAGGAAGGAAAATTGGAGTTAAACAAGCTATACAACGTGCACCACGTGAACAACGTCGATCAAAGGGGGATCAAGAAAGCACCGCTGATGCAAAAGATGCCAAGGACGTTCCTTCTACTGAAATAGTCAAGCACGAACAAGCTTCAAGCTCTCAGGGAACAGAAAGCACTGCTCATAAAGAAGATGACAGGGATTGTCCTTCTACTGAAATAGTTGAGAAGAAACAAGCTTCAAACTCGCAGGGAACAGAAAACCTAGGGAAACCCACTAGAAAAAGAAAGGCTGCATTGCTTTGCGATGGTGCTGCTGATGAAGGAAATTATTCAGGAAAACAGAGGGTCGCCAGGACAGTTATAATAGGAGGTATTGTAAATGCGGATATGGCAAAGGAGGTTCACCAGCTTGTGCAGAAGTGTGGCACCATATGTTCTGTTACTTACCCTCTTCCAAAAGAAGAGATTGAAAGTCATGGGCTAGCACAGGATGGTTGTAAGATGGATGCTTCATCTGTACTTTTCACTAGTGTCAAATCAGCTCAAGTTTGTGTTGCATCATTACACCAAAAAGAAGTAAATGGAGCAACACTTTGGGCACGCCAACTTGGTGGAGAGGGCTCAAAGACGCAAAGGTGGAAACTTATAATGAGGAATCTTCCTTTTAAGGCCAAAGTGAATGAGATAAAAGATCTGTTTTCAAAAGTTGGCTTCGTGTGGGATGTGGTTATTCCTAAGAATTCTGAGACAGGGTTATCAAAAGGATTTGCGTTTGTCAAATTTACGTCGAAGCAGGATGCAGAGAATGTTATTAAGACATTTAATGGGAAAACATTGAGTAAGCGAACTATTGCAGTTGATTGGGCCGTATCAAAAAAGGTTTATGCAGCTGGTGGTCAATCTTCAGCAACTGTACAAGATGGACAGGACACAAAAGATGATAGTAGTAGTGATACGGATGAAGACGTTGAAATTGATGGAAAATCTCAGCAAGCTGAAGAGGACGGAGATGACTCTCACCTTTTAGAAGAAGAAAATAACCAGACTGAAGTTAATTTTGACGAAGAGGCAAACATTGCGAAAAAAGTTCTTCAGAATTTCATTTCTCCAACTTCAATAGGGCCAACTACTTCTACAAATGATATTTCGGGCCTTCCCAAGCAGGGAAAGGATGTTGAAACTATTCTCCCACCAGATGAACCACTGGGTGCATGTGCATCTACGGCAAATAAAACACCACACGACAATTTAGACAAGAACAAAGAGATTAATGCTGGGCAGAGTGAGGGAGCAGATGATCTGCAGGGAACAGTTTTCATTAGCAACCTTCCTTTTGACGTTGATAATAAAGAAGTCAAACAACGGTTTTCTGCTTTTGGTGAAGTGGAGTACTTTGCTCCGGTTCTTGACCGAGTCACCAAGCGACCAAGGGGTACTGGTTTTCTCAAATTTAAAACAGCAGAGGCTGCTGAAGCTGCTGTTTCCGCTGCCAATGTTGTGGATGGTTTAGGTATCTTTCTGAAGGGTCGGCAATTAAAGATTTTGAAGGCTTTGGACAAGAAAGCTGCTCATGATAAGGAGTTGGAGAAGGCCAAAAAGGAGGATAGTGATCACCGCAACCTTTACCTGGCAAAGGAGGGTCTTATTGTGGAGGGGACCCCAGCTGCTGAAGGTGTTTCAGTGAGTGATATGTCAAAGCGCAAGGGGCTGCAAGAAAAGAAGATGATCAAGCTGAAATCCCCAAATTTCCATGTGTCAAGGACACGACTGATTGTATACAATCTTCCCAAGTCGATGACTGAAAAACAGCTGAAGACACTTTGCATTGATGCAGTTACCTCTCGTGCTACTAAGCAAAAGCCTGTGATCCGGCAGATAAAGTTTTTGAAGGATGTGAAAAAAGGACAAGTAGTAGCAAAGAATCATTCTCGCGGAGTAGCTTTTCTTGAGTTCTCAGAGCATCAACATGCACTTGTGGCTTTAAGAGTTCTCAACAACAATCCTGAGACTTTTGGTCCTGAGCATCGTCCAATAGTGGAGTTTGCTCTTGATAATGTGCAAACAATGAAGCTTCGTAATCAGAAACTTCAGCAGCAAGGTTTTAACAAGAACAGAGAAGATCTGCAGCAGAAAGCCAATAAAACTGAACTGAATCCCCGAGATAAACAGTCAAGAAAACGCAAGTCCAGTGGGGACACATTATCAGTTGCTGGGAATAGAGATGTAGTGAAAAGCAAGCGTGTCAGAGGTGCCACTGCAGAGGAAGGCAATGCATCATCAGTTTCAGGGAGTAAAGATGGAGATGAACTGAAAAATAGAGGTGCCAGAGGAACCAACAAAGAAGAAAGAGATGAGAAGAAGAACAACAACAAGAGGGAAGGTAAAAAGCTAGGAGGCACAAAACAAAAGCCAAAAGATAATCAAGAAGGAAAAAAGCTTGGCAGATTTGGAAATGAACATTCAGATAATGCTACTCTCAAGGTTGGACATAAAGAAGATGTTGCAGTGAGAACAAAAAGGAGGAAGTTGGAAGATAAAACTAACCAACAGAAACAAAATATGAGTTTACAGGTCAAGAAAAAGGATAAAAAGAATAAAGACCCGGTGGGACGGGATGCTGTGGACAAGTTGGATATGCTGATTGAGCAATACAGATCCAAATTCACAAACAACAGTTCTAATCAAACTGATAGTAAGCAGCAGGGCTCTAAACAGCTTAAAAGGTGGTTCCAATCCTAA |
| Protein: MGKNKKTMSNGDSQHSPATIFVTNLPYSFTNAQLEETFSEVGPIRRCFMVTNKGSSEHRGFGFVQFASVDDANRSIELKNGTVVGGRKIGVKQAIQRAPREQRRSKGDQESTADAKDAKDVPSTEIVKHEQASSSQGTESTAHKEDDRDCPSTEIVEKKQASNSQGTENLGKPTRKRKAALLCDGAADEGNYSGKQRVARTVIIGGIVNADMAKEVHQLVQKCGTICSVTYPLPKEEIESHGLAQDGCKMDASSVLFTSVKSAQVCVASLHQKEVNGATLWARQLGGEGSKTQRWKLIMRNLPFKAKVNEIKDLFSKVGFVWDVVIPKNSETGLSKGFAFVKFTSKQDAENVIKTFNGKTLSKRTIAVDWAVSKKVYAAGGQSSATVQDGQDTKDDSSSDTDEDVEIDGKSQQAEEDGDDSHLLEEENNQTEVNFDEEANIAKKVLQNFISPTSIGPTTSTNDISGLPKQGKDVETILPPDEPLGACASTANKTPHDNLDKNKEINAGQSEGADDLQGTVFISNLPFDVDNKEVKQRFSAFGEVEYFAPVLDRVTKRPRGTGFLKFKTAEAAEAAVSAANVVDGLGIFLKGRQLKILKALDKKAAHDKELEKAKKEDSDHRNLYLAKEGLIVEGTPAAEGVSVSDMSKRKGLQEKKMIKLKSPNFHVSRTRLIVYNLPKSMTEKQLKTLCIDAVTSRATKQKPVIRQIKFLKDVKKGQVVAKNHSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTMKLRNQKLQQQGFNKNREDLQQKANKTELNPRDKQSRKRKSSGDTLSVAGNRDVVKSKRVRGATAEEGNASSVSGSKDGDELKNRGARGTNKEERDEKKNNNKREGKKLGGTKQKPKDNQEGKKLGRFGNEHSDNATLKVGHKEDVAVRTKRRKLEDKTNQQKQNMSLQVKKKDKKNKDPVGRDAVDKLDMLIEQYRSKFTNNSSNQTDSKQQGSKQLKRWFQS |